A rapid method to detect duplex formation in sequencing by...

C - Chemistry – Metallurgy – 07 – H

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C07H 21/00 (2006.01) B01J 19/00 (2006.01) B01J 19/08 (2006.01) B05D 1/00 (2006.01) C12N 15/10 (2006.01) C12Q 1/68 (2006.01) G01N 33/544 (2006.01) G01N 33/553 (2006.01)

Patent

CA 2338540

A method for determining the existence of duplexes of oligonucleotide complementary molecules is provided whereby a plurality of immobilized oligonucleotide molecules, each of a specific length and each having a specific base sequence, is contacted with complementary, single stranded oligonucleotide molecules to form a duplex so as to facilitate intercalation of a fluorescent dye between the base planes of the duplex. The invention also provides for a method for constructing oligonucleotide matrices comprising confining light sensitive fluid to a surface, exposing said light-sensitive fluid to a light pattern so as to cause the fluid exposed to the light to polymerize into discrete units and adhere to the surface; and contacting each of the units with a set of different oligonucleotide molecules so as to allow the molecules to disperse into the units.

L'invention concerne un procédé permettant de déterminer l'existence de doubles hélices dans les molécules complémentaires d'oligonucléotides, consistant à mettre en contact une pluralité de molécules oligonucléotidiques immobilisées possédant chacune une longueur spécifique et une séquence de bases spécifique avec des molécules oligonucléotidiques complémentaires à un seul brin pour former une double hélice de manière à faciliter l'insertion d'un colorant fluorescent entre les surfaces des bases de la double hélice. L'invention concerne en outre un procédé de production de matrices d'oligonucléotides consistant à retenir un fluide photosensible sur une surface, à exposer ce fluide photosensible à un diagramme de lumière de manière à provoquer la polymérisation du fluide en unités discrètes et son adhérence à la surface, puis à faire entrer chacune de ces unités en contact avec une série de différentes molécules oligonucléotidiques de manière à permettre la dispersion des molécules dans ces unités.

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