Chromosome specific staining to detect genetic rearrangements

C - Chemistry – Metallurgy – 12 – Q

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C12Q 1/68 (2006.01) C12N 15/10 (2006.01)

Patent

CA 2060267

-97- CHROMOSOME-SPECIFIC STAINING TO DETECT GENETIC RE~RRANGE~ENTS ~STRACT OF_THE DISCLOSURE Provided ar~ methods and compositions ~or stainlng chromosomal material based upon nucleic acid se~uence employing high complexity nucleic acid probes ~herein t:he staining pattern produced is indicative of the presence or absence of one or more genetic rearrangements involvlng chromosomes 3, 13 and/or 17. Said probes are appropriate for in situ hybridi~ation and stain both int~rphase and metapha~e chromosomal material with reliable signals. The staining methods can be used in conjunction with digital image analysi~. Probes and test kits are provided ~or use in detecting genetic rearrangements, particularly those related to tumor suppre~sor genes~ in the detection of disPase related loci, specifically cancer, such as retinoblastomas, ost~osarcomas, lung cancer, breast cancer, oYarian and uterine cancers, and for biologica} dosimetry. Re~erence probes, for ~xample, centromeric alph~ satellite probes, can be a component of the high complexity probes.

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