Method and apparatus for sequence annotation

G - Physics – 06 – F

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G06F 19/00 (2006.01) G06F 17/30 (2006.01) C40B 30/02 (2006.01) C40B 50/02 (2006.01)

Patent

CA 2504632

Techniques for annotating sequences. In one aspect of the invention, a method is provided for annotating a query sequence. The method comprises the following steps. Patterns associated with a database, comprising annotated sequences, are accessed. Attributes are assigned to the patterns based on the annotated sequences. The patterns with assigned attributes are used to analyze the query sequence.

L'invention concerne des techniques permettant d'annoter des séquences. Dans un mode de réalisation de l'invention, un procédé permet d'annoter une séquence d'interrogation. Le procédé comprend les étapes suivantes consistant : à évaluer des motifs associés à une base de données, comprenant des séquences annotées ; à attribuer des attributs aux motifs en fonction des séquences annotées ; et à utiliser les motifs comprenant des attributs attribués aux fins d'analyse de la séquence d'interrogation.

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