Methods and apparatus for protein sequence analysis

Details Methods and apparatus for protein sequence analysis Methods and apparatus for protein sequence analysis

C - Chemistry, Metallurgy

40

B

C40B 30/02 (2006.01) G01N 33/68 (2006.01) G06F 19/00 (2006.01)

Patent

CA 2465355

Apparatus, methods, media, signals and data structures for protein sequence analysis are disclosed. A method includes identifying, from among a first group of aligned protein sequences having at least a threshold degree of alignment with a first protein sequence, a second group of at least one of the aligned sequences having at least one insertion or deletion ("indel") relative to the first protein sequence satisfying a predefined condition. The apparatus may include a processor circuit configured to carry out the method.

L'invention concerne un appareil, des procédés, des supports, des signaux et des structures de données permettant l'analyse d'une séquence protéique. Un des procédés consiste à identifier, à partir d'un premier groupe de séquences protéiques alignées ayant au moins un degré seuil d'alignement par rapport à une première séquence protéique, un second groupe d'au moins une des séquences alignées ayant au moins une insertion ou une suppression ("indel") associée à la première séquence protéique répondant à une condition prédéfinie. L'appareil peut comporter un circuit processeur configuré de manière à mettre en oeuvre le procédé.

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