Process and method for monitoring gastrointestinal microbiota

C - Chemistry – Metallurgy – 12 – Q

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C12Q 1/68 (2006.01) C07H 21/04 (2006.01) C40B 30/04 (2006.01)

Patent

CA 2720292

Disclosed are methods for monitoring the gastrointestinal tract of the human gastrointestinal system. The method includes: 1) grouping microbes into specific operational taxonomic units (OTU); 2) using oligonucleotide probes and PCR primers to detect and quantify specific microbes (bacteria, fungi/yeast, protozoans and parasitic worms) in human fecal material. The inventions also discloses a kit that includes: a DNA isolation step; 2) accumulation of specific operational taxonomic units (OTU); 3) identification and quantifying of sequences internal to the OTU; 4) reporting changes the indigenous population of the human gastrointestinal system.

L'invention porte sur des procédés pour surveiller le tractus gastro-intestinal du système gastro-intestinal humain. Le procédé comprend les opérations consistant à : 1) grouper des microbes en unités taxonomiques opérationnelles spécifiques (OTU) ; 2) utiliser des sondes oligonucléotidiques et des amorces de PCR pour détecter et quantifier des microbes spécifiques (bactéries, champignons/levure, protozoaires et vers parasites) dans une matière fécale humaine. Les inventions décrivent également un kit qui comprend : une étape d'isolation de l'ADN ; 2) une accumulation d'unités taxonomiques opérationnelles spécifiques (OTU) ; 3) une identification et une quantification de séquences internes à l'OTU ; 4) le rapport de changements de la population indigène du système gastro-intestinal humain.

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